Review




Structured Review

Bioedit Company bioedit sequence alignment software
Bioedit Sequence Alignment Software, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/Alignment+Software/alignment+bioedit+editor+sequence/pm42021945-85-8-8
Average 86 stars, based on 1 article reviews
bioedit sequence alignment software - by Bioz Stars, 2026-09
86/100 stars

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Related Articles

Sequencing:

Article Title: Impact of DNA Extraction Strategies on Genomic and Bioinformatic Outcomes in Eight Selected Fungal Strains
Article Snippet: .. Forward and reverse sequences of each region/domain were aligned with Bioedit Sequence Alignment Editor version 7.2 ( https://bioedit.software.informer.com/7.2/ , last access 14 February 2025), optimized and corrected manually and based on three replicates, when necessary, to obtain the consensus sequences. ..

Article Title: Genetic insights into dabie bandavirus from a clinical case of severe fever with thrombocytopenia syndrome in Longyou County, China.
Article Snippet: .. 1.4 Sequence Analysis:The following computer software was used to process the determined structural gene sequences: SeqMan (Ultra 17.2) for sequence assembly; Clustal X (2.1) for multiple sequence alignment; BioEdit (v7.2.6.1) for identifying genetic locus characteristics; and MEGA (v7.0.26) with the Maximum Likelihood method (bootstrap = 1000) for phylogenetic analysis. ..

Article Title: Distribution of apple chlorotic leafspot virus and prunus necrotic ringspot virus in diverse stone fruit cultivars of North Western Himalayan region of India.
Article Snippet: Botanically, stone fruits also known as drupes are characterized by having a fleshy mesocarp, thin skin and a hard-inner pit or stone containing a seed.. They belong to the family Rosaceae, and genus Prunus.. Sweet cherry (Prunus avium L.), peach, nectarine (Prunus persica L.), European plum (Prunus domestica L.), Japanese plum (Prunus salicina L.), and apricot (Prunus armeniaca L.) are the main market class stone fruits [1] grown throughout the world.

Article Title: TGF‐β1 Gene Polymorphisms in Saudi Patients With Type 2 Diabetes With or Without Diabetic Nephropathy
Article Snippet: .. The sequencing readings were obtained using an ABI 3500 Genetic Analyzer, and the raw data files generated were analyzed using BioEdit sequence alignment software ( https://www.mbio.ncsu.edu/BioEdit/bioedit.html ). .. Data entry and analysis were done using the Statistical Package for the Social Sciences software, Version 28.

Software:

Article Title: Genetic insights into dabie bandavirus from a clinical case of severe fever with thrombocytopenia syndrome in Longyou County, China.
Article Snippet: .. 1.4 Sequence Analysis:The following computer software was used to process the determined structural gene sequences: SeqMan (Ultra 17.2) for sequence assembly; Clustal X (2.1) for multiple sequence alignment; BioEdit (v7.2.6.1) for identifying genetic locus characteristics; and MEGA (v7.0.26) with the Maximum Likelihood method (bootstrap = 1000) for phylogenetic analysis. ..

Article Title: Distribution of apple chlorotic leafspot virus and prunus necrotic ringspot virus in diverse stone fruit cultivars of North Western Himalayan region of India.
Article Snippet: Botanically, stone fruits also known as drupes are characterized by having a fleshy mesocarp, thin skin and a hard-inner pit or stone containing a seed.. They belong to the family Rosaceae, and genus Prunus.. Sweet cherry (Prunus avium L.), peach, nectarine (Prunus persica L.), European plum (Prunus domestica L.), Japanese plum (Prunus salicina L.), and apricot (Prunus armeniaca L.) are the main market class stone fruits [1] grown throughout the world.

Article Title: Characterization of Salmonella spp. Based on CRISPR PCR and FT-IR Approaches: A Pilot Study in Northern Italy
Article Snippet: .. The specificity of the method was checked in silico on CRISPR 2 sequences of representative Salmonella strains (e.g., S. enteritidis JF725428 and JF72543; S. Typhimurium JF725638 ; S. 4,5,12:i:- JF725292 and JF725259 ) using multiple-alignment software provided in the BioEdit package, version 7.2.6.1. .. PCR was then performed in a reaction volume of 25 μL using 1X DreamTaq Hot Start PCR Master Mix (Thermo Scientific, Waltham, MA, USA), 10 μM of each primer and 5 μL of DNA.

Article Title: TGF‐β1 Gene Polymorphisms in Saudi Patients With Type 2 Diabetes With or Without Diabetic Nephropathy
Article Snippet: .. The sequencing readings were obtained using an ABI 3500 Genetic Analyzer, and the raw data files generated were analyzed using BioEdit sequence alignment software ( https://www.mbio.ncsu.edu/BioEdit/bioedit.html ). .. Data entry and analysis were done using the Statistical Package for the Social Sciences software, Version 28.

Article Title: Characterization of Salmonella spp. Based on CRISPR PCR and FT-IR Approaches: A Pilot Study in Northern Italy
Article Snippet: .. The specificity of the method was checked in silico on CRISPR 2 sequences of representative Salmonella strains (e.g., S. enteritidis JF725428 and JF72543; S. Typhimurium JF725638; S. 4,5,12:i:- JF725292 and JF725259) using multiple-alignment software provided in the BioEdit package, version 7.2.6.1. .. PCR was then performed in a reaction volume of 25 μL using 1X DreamTaq Hot Start PCR Master Mix (Thermo Scientific, Waltham, MA, USA), 10 μM of each primer and 5 μL of DNA.

In Silico:

Article Title: Characterization of Salmonella spp. Based on CRISPR PCR and FT-IR Approaches: A Pilot Study in Northern Italy
Article Snippet: .. The specificity of the method was checked in silico on CRISPR 2 sequences of representative Salmonella strains (e.g., S. enteritidis JF725428 and JF72543; S. Typhimurium JF725638 ; S. 4,5,12:i:- JF725292 and JF725259 ) using multiple-alignment software provided in the BioEdit package, version 7.2.6.1. .. PCR was then performed in a reaction volume of 25 μL using 1X DreamTaq Hot Start PCR Master Mix (Thermo Scientific, Waltham, MA, USA), 10 μM of each primer and 5 μL of DNA.

Article Title: Characterization of Salmonella spp. Based on CRISPR PCR and FT-IR Approaches: A Pilot Study in Northern Italy
Article Snippet: .. The specificity of the method was checked in silico on CRISPR 2 sequences of representative Salmonella strains (e.g., S. enteritidis JF725428 and JF72543; S. Typhimurium JF725638; S. 4,5,12:i:- JF725292 and JF725259) using multiple-alignment software provided in the BioEdit package, version 7.2.6.1. .. PCR was then performed in a reaction volume of 25 μL using 1X DreamTaq Hot Start PCR Master Mix (Thermo Scientific, Waltham, MA, USA), 10 μM of each primer and 5 μL of DNA.

CRISPR:

Article Title: Characterization of Salmonella spp. Based on CRISPR PCR and FT-IR Approaches: A Pilot Study in Northern Italy
Article Snippet: .. The specificity of the method was checked in silico on CRISPR 2 sequences of representative Salmonella strains (e.g., S. enteritidis JF725428 and JF72543; S. Typhimurium JF725638 ; S. 4,5,12:i:- JF725292 and JF725259 ) using multiple-alignment software provided in the BioEdit package, version 7.2.6.1. .. PCR was then performed in a reaction volume of 25 μL using 1X DreamTaq Hot Start PCR Master Mix (Thermo Scientific, Waltham, MA, USA), 10 μM of each primer and 5 μL of DNA.

Article Title: Characterization of Salmonella spp. Based on CRISPR PCR and FT-IR Approaches: A Pilot Study in Northern Italy
Article Snippet: .. The specificity of the method was checked in silico on CRISPR 2 sequences of representative Salmonella strains (e.g., S. enteritidis JF725428 and JF72543; S. Typhimurium JF725638; S. 4,5,12:i:- JF725292 and JF725259) using multiple-alignment software provided in the BioEdit package, version 7.2.6.1. .. PCR was then performed in a reaction volume of 25 μL using 1X DreamTaq Hot Start PCR Master Mix (Thermo Scientific, Waltham, MA, USA), 10 μM of each primer and 5 μL of DNA.

Generated:

Article Title: TGF‐β1 Gene Polymorphisms in Saudi Patients With Type 2 Diabetes With or Without Diabetic Nephropathy
Article Snippet: .. The sequencing readings were obtained using an ABI 3500 Genetic Analyzer, and the raw data files generated were analyzed using BioEdit sequence alignment software ( https://www.mbio.ncsu.edu/BioEdit/bioedit.html ). .. Data entry and analysis were done using the Statistical Package for the Social Sciences software, Version 28.



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